Dr Shoaie Dr Saeed Shoaie Academics Supervisors Senior Lecturer in Systems & Synthetic Biology Research subject areas Host-Microbiome Interactions Contact details +44 20 7188 9613 saeed.shoaie@kcl.ac.uk
Genome-scale metabolic modelling of the human gut microbiome reveals changes in the glyoxylate and dicarboxylate metabolism in metabolic disorders Proffitt, C., Bidkhori, G., Lee, S., Tebani, A., Mardinoglu, A., Uhlen, M., Moyes, D. L. & Shoaie, S., 15 Jul 2022, In: iScience. 25, 7, 104513. Research output: Contribution to journal › Article › peer-review. DOIs: https://doi.org/10.1016/j.isci.2022.104513 Irritable bowel syndrome and microbiome; Switching from conventional diagnosis and therapies to personalized interventions Ghaffari, P., Shoaie, S. & Nielsen, L. K., Dec 2022, In: Journal Of Translational Medicine. 20, 1, 173. Research output: Contribution to journal › Review article › peer-review. DOIs: https://doi.org/10.1186/s12967-022-03365-z Prediction of drug candidates for clear cell renal cell carcinoma using a systems biology-based drug repositioning approach Li, X., Shong, K., Kim, W., Yuan, M., Yang, H., Sato, Y., Kume, H., Ogawa, S., Turkez, H., Shoaie, S., Boren, J., Nielsen, J., Uhlen, M., Zhang, C. & Mardinoglu, A., Apr 2022, In: EBioMedicine. 78, 103963. Research output: Contribution to journal › Article › peer-review. DOIs: https://doi.org/10.1016/j.ebiom.2022.103963 A Gene Co-Expression Network-Based Drug Repositioning Approach Identifies Candidates for Treatment of Hepatocellular Carcinoma Yuan, M., Shong, K., Li, X., Ashraf, S., Shi, M., Kim, W., Nielsen, J., Turkez, H., Shoaie, S., Uhlen, M., Zhang, C. & Mardinoglu, A., 19 Mar 2022, In: Cancers. 14, 6, 1573. Research output: Contribution to journal › Article › peer-review. DOIs: https://doi.org/10.3390/cancers14061573 Multiomics Analysis Reveals the Impact of Microbiota on Host Metabolism in Hepatic Steatosis Zeybel, M., Arif, M., Li, X., Altay, O., Yang, H., Shi, M., Akyildiz, M., Saglam, B., Gonenli, M. G., Yigit, B., Ulukan, B., Ural, D., Shoaie, S., Turkez, H., Nielsen, J., Zhang, C., Uhlén, M., Borén, J. & Mardinoglu, A., 7 Feb 2022, (E-pub ahead of print) In: Advanced Science. 9, 11 Research output: Contribution to journal › Article › peer-review. DOIs: https://doi.org/10.1002/advs.202104373 Role of Cellular Metabolism during Candida-Host Interactions Pellon, A., Begum, N., Nasab, S. D. S., Harzandi, A., Shoaie, S. & Moyes, D. L., Feb 2022, In: Pathogens. 11, 2, 184. Research output: Contribution to journal › Review article › peer-review. DOIs: https://doi.org/10.3390/pathogens11020184 Systems biology approaches to decipher the underlying molecular mechanisms of glioblastoma multiforme Kaynar, A., Altay, O., Li, X., Zhang, C., Turkez, H., Uhlén, M., Shoaie, S. & Mardinoglu, A., 1 Dec 2021, In: International Journal of Molecular Sciences. 22, 24, 13213. Research output: Contribution to journal › Article › peer-review. DOIs: https://doi.org/10.3390/ijms222413213 Combined metabolic activators therapy ameliorates liver fat in nonalcoholic fatty liver disease patients Zeybel, M., Altay, O., Arif, M., Li, X., Yang, H., Fredolini, C., Akyildiz, M., Saglam, B., Gonenli, M. G., Ural, D., Kim, W., Schwenk, J. M., Zhang, C., Shoaie, S., Nielsen, J., Uhlén, M., Borén, J. & Mardinoglu, A., Oct 2021, In: Molecular Systems Biology. 17, 10, e10459. Research output: Contribution to journal › Article › peer-review. DOIs: https://doi.org/10.15252/msb.202110459 Revealing the molecular mechanisms of alzheimer’s disease based on network analysis Bayraktar, A., Lam, S., Altay, O., Li, X., Yuan, M., Zhang, C., Arif, M., Turkez, H., Uhlén, M., Shoaie, S. & Mardinoglu, A., 1 Nov 2021, In: International Journal of Molecular Sciences. 22, 21, 11556. Research output: Contribution to journal › Article › peer-review. DOIs: https://doi.org/10.3390/ijms222111556 Rifaximin reduces gut-derived inflammation and mucin degradation in cirrhosis and encephalopathy: RIFSYS randomised controlled trial Patel, V. C., Lee, S., McPhail, M. J. W., Zamalloa, A., Witherden, E., Stoy, S., Vijay, G. M., Huang, X., Gencer, S., Coen, M., Tranah, T., Wendon, J., Bruce, K., Ehrlich, D., Edwards, L. A., Shoaie, S. & Shawcross, D. L., Feb 2022, In: Journal of Hepatology. 76, 2, p. 332-342 11 p. Research output: Contribution to journal › Article › peer-review. DOIs: https://doi.org/10.1016/j.jhep.2021.09.010 View all publications
12 August 2021 Academic Promotions at the Faculty of Dentistry, Oral & Craniofacial Sciences Very many congratulations to the following members of the Faculty of Dentistry, Oral & Craniofacial…